Fig. 2

Differential gene expression between groups as detected by sleuth. Volcano plots indicating effect size (beta value) and significance (p < 0.01 by color) for each transcript in a ethanol, b stress, and c ethanol + stress groups compared to control treatment with nominally significant (p < 0.001), annotated genes labeled. d Venn diagram of overlapping transcripts differentially expressed in each treatment as compared to controls (p < 0.01). e Volcano plot indicating effect size (beta value) and significance for transcripts with an expanded scale and significant (q < 0.05) annotated genes labeled for ethanol + stress compared to control, where dashed line indicates the axis cutoff of 6 presented in c