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Table 3 Description of markers genotyped

From: Association of oxytocin receptor (OXTR) gene variants with multiple phenotype domains of autism spectrum disorder

Marker Chr3 Location bp from TrxSt Genotyped by Location in OXTR
rs9860869 8,795,740 −9,440 GWAS Promoter
rs75775 8,795,732 −9,432 GWAS Promoter
rs6443206 8,795,075 −8,775 GWAS Promoter
rs401015 8,789,012 −2,712 In-house Promoter
rs6777726 8,788,494 −2,194 GWAS Promoter
rs2301261 8,785,896 404 GWAS Intron 1
rs4686302 8,784,222 2,078 GWAS Exon 3
rs237897 8,783,285 3,015 In-house Intron 3
rs53576 8,779,371 6,929 In-house Intron 3
rs237889 8,777,483 8,817 GWAS Intron 3
rs2254298 8,777,228 9,072 In-house Intron 3
rs2268493 8,775,840 10,460 In-house Intron 3
rs2268492 8,775,672 10,628 GWAS Intron 3
rs2268491 8,775,398 10,902 GWAS Intron 3
rs237888 8,772,095 14,205 GWAS Intron 3
rs2268490 8,772,085 14,215 GWAS Intron 3
rs237887 8,772,042 14,258 GWAS Intron 3
rs11706648 8,771,547 14,753 GWAS Intron 3
rs237885 8,770,543 15,757 In-house Intron 3
rs1042778 8,769,545 16,755 Combined Exon 4—3′ UTR
rs6770632 8,768,724 17,576 In-house Exon 4—3′ UTR
rs9872310 8,768,381 17,919 In-house Exon 4—3′ UTR
rs7632287 8,766,446 19,854 GWAS Intergenic
rs17297803 8,758,207 28,093 GWAS CAV3 Intron 2
rs237875 8,757,406 28,894 GWAS CAV3 Intron 2
  1. For each marker, the location on chromosome 3 and the distance from the transcription start (TrxSt) site of OXTR are indicated. Also listed is whether the marker was genotyped by the Levitt lab in-house using Taqman assays or by the Broad Institute using the Affymetrix 5.0 GWAS platform