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Table 2 Laboratory findings, clinical features, and family histories of seven patients with 3p26.3 duplication involving CNTN6 gene

From: CNTN6 copy number variations in 14 patients: a possible candidate gene for neurodevelopmental and neuropsychiatric disorders

Patients

Age (year)

CNV sizes

Coordinates (hg18)

Inheritance

OMIM genes

Types of deletion

Reasons for referral

Other features

Family history of NDDs and/or neuropsychiatric disorders

8

7

718.82 kb

476,636–1,195,459

Maternally inherited

CNTN6

Upstream and exons 1–2

DD, SZs

ADHD, DBD, abnormal EEG, macrocephaly, epicanthal folds, high and wide nasal bridge, broad nasal tip, large central incisors

Mother: normal phenotype; father: schizophrenia, alcoholic; sister: DD; maternal half brother: ADHD, hearing loss, anxiety

9

8

541.62 kb

855,662–1,397,284

Unknown

CNTN6

Upstream and exons 1–17

DD

Short stature, reflux

Father: depression; mother: ADHD, anxiety

10

6

199.60 kb

1,124,286–1,323,884

Unknown

CNTN6

Exons 2–7

DD

Short stature, reflux, joint hypermobility, microcephaly, low anterior hairline, second and third toe syndactyly

A sister: ASD, microcephaly; another sister: microcephaly; brother: ASD; paternal half brother: ADHD; both parents: microcephaly; paternal grandmother: seizures

11

7

489.60 kb

1,172622–1,662,216

Paternally inherited

CNTN6

Exons 3–23 and downstream

DD, ASD, SZs

LD, ADHD, ODD, VSD, feeding difficulties, failure to thrive, brachycephaly, upswept anterior hairline, unusual large hallux, and short second toe

Father: bipolar disorder and ADHD; brother: ADHD, ODD; paternal twin half sisters: DD; mother: bipolar disorder, migraines; maternal grandaunt: migraine

12

9

281 kb

1,189,367–1,470,327

Unknown

CNTN6

Exons 4–23 and downstream

LD

No

Father: ID, ADHD, bipolar disorder, depression; mother: bipolar disorder, depression; sibling: LD; sister: ID

13

15

886.76 kb

243,741–1,130,505

Maternally inherited

CHL1, CNTN6

Whole CHL1 and exons 1 of CNTN6

Obesity, ADHD, bipolar

OCD, migraine, scoliosis, fibromyalgia, rheumatoid arthritis, asthma, irritable bowel syndrome

Mother: migraines, fibromyalgia, psychiatric problem; twin brother and sister: bipolar disorder; maternal half sister: ADHD, psychiatric problems; paternal grandmother: migraines

14

16

2.05 Mb

413,294–2,465,270

Unknown

CHL1, CNTN6, CNTN4

Exons 23–25 of CHL1, CNTN6 and exons 1–2 of CNTN4

DD, SZs, dysmorphic

ADHD, OCD, sensorineural hearing loss, asymmetric face, left esotropia, bilateral ptosis, high-arched palate, short stature, single palmar creases, fifth finger clinodactyly, cranial nerve palsy, micropenis

Father: depression; paternal cousin: ASD

  1. ADHD attention deficit hyperactivity disorder, ASD autism spectrum disorder, CNV copy number variation, DBD disruptive behavior disorders, DD developmental delay, dup duplication, EEG electroencephalography, ID intellectual disability, LD learning disability, NDD neurodevelopmental disorder, OCD, obsessive–compulsive disorder, ODD oppositional defiant disorder, VSD ventricular septal defect, SZs seizures