Table 2 Significant and suggestive association results for LPAx

rs79453226

chr4

4483114

G

C

1.91e-08

0.036

STX18 (intron)

0.421 (0.074)

rs11829294

chr12

3014153

C

T

2.40e-08

0.145

TEAD4 (intron)

− 0.231 (0.041)

rs10774094

chr12

3014630

C

A

5.21e-08

0.160

TEAD4 (intron)

− 0.214 (0.039)

rs12322215

chr12

3001421

G

T

1.08e-07

0.142

TEAD4 (intron)

− 0.215 (0.040)

rs10128796

chr12

3003552

G

A

1.11e-07

0.142

TEAD4 (intron)

− 0.214 (0.040)

rs73916918

chr19

376264

C

T

1.17e-07

0.020

THEG (5’ UTR)

0.522 (0.097)

rs59359613

chr1

113154555

C

T

1.83e-07

0.023

intergenic

0.465 (0.088)

rs16913588

chr9

28733517

T

C

2.05e-07

0.036

intergenic

0.396 (0.075)

rs58545250

chr1

113172866

T

C

2.14e-07

0.024

RP11-389O22.4 (downstream)

0.438 (0.083)

rs61114884

chr12

3004684

T

A

2.39e-07

0.135

TEAD4 (intron)

− 0.210 (0.040)

rs28411755

chr4

124309484

T

C

3.40e-07

0.025

intergenic

0.431 (0.083)

rs7657348

chr4

124310584

A

G

3.40e-07

0.025

intergenic

0.431 (0.083)

rs76946462

chr18

22326760

A

G

3.96e-07

0.057

intergenic

0.278 (0.054)

rs77039990

chr18

22327483

G

A

3.97e-07

0.057

intergenic

0.278 (0.054)

rs76500624

chr18

22326662

G

A

3.97e-07

0.057

intergenic

0.278 (0.054)

rs75050632

chr18

22327123

G

A

4.03e-07

0.057

intergenic

0.277 (0.054)

rs115606157

chr3

108839197

T

G

4.53e-07

0.030

TRAT1 (intron)

0.385 (0.07)

rs73690518

chr8

65242418

C

T

4.80e-07

0.048

intergenic

0.355 (0.070)

rs17031018

chr1

113100296

A

G

5.27e-07

0.035

LRIG2 (intron)

0.377 (0.074)

rs61917974

chr12

3011978

T

C

6.33e-07

0.109

TEAD4 (intron)

− 0.223 (0.044)

rs12296242

chr12

3006641

G

C

6.49e-07

0.133

TEAD4 (intron)

− 0.202 (0.040)

rs143601180

chr3

4370781

A

G

6.56e-07

0.032

SUMF1 (intron)

0.383 (0.076)

rs79946490

chr3

4385952

C

T

6.64e-07

0.032

SUMF1 (intron)

0.383 (0.076)

rs17031120

chr1

113144809

T

C

7.12e-07

0.021

intergenic

0.462 (0.092)

rs2163633

chr2

81884390

C

A

7.36e-07

0.046

intergenic

− 0.350 (0.070)

rs6716465

chr2

81871292

G

C

7.43e-07

0.045

intergenic

− 0.350 (0.070)

rs11062457

chr12

3010236

C

T

7.44e-07

0.145

TEAD4 (intron)

− 0.201 (0.040)

rs72921448

chr2

81824332

T

C

7.44e-07

0.045

intergenic

− 0.350 (0.070)

rs2286647

chr12

3010912

C

T

7.46e-07

0.145

TEAD4 (intron)

− 0.201 (0.040)

rs116629423

chr2

81858789

A

G

7.47e-07

0.045

intergenic

− 0.350 (0.070)

rs143923810

chr12

2988024

C

T

7.73e-07

0.139

TEAD4 (intron)

− 0.194 (0.039)

rs10493588

chr1

76227682

C

T

8.04e-07

0.057

ST6GALNAC3 (intron)

0.279 (0.056)

rs17098434

chr1

76232427

G

A

8.85e-07

0.057

ST6GALNAC3 (intron)

0.277 (0.056)

rs8025099

chr15

91488748

C

A

9.06e-07

0.486

CRAT37 (intron)

− 0.129 (0.026)

rs12318430

chr12

3006040

C

A

9.75e-07

0.132

TEAD4 (intron)

− 0.201 (0.040)

rs9424366

chr1

24475103

G

C

9.86e-07

0.036

NIPAL3 (downstream)

0.349 (0.070)