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Using causal methods to map symptoms to brain circuits in neurodevelopment disorders: moving from identifying correlates to developing treatments

Abstract

A wide variety of model systems and experimental techniques can provide insight into the structure and function of the human brain in typical development and in neurodevelopmental disorders. Unfortunately, this work, whether based on manipulation of animal models or observational and correlational methods in humans, has a high attrition rate in translating scientific discovery into practicable treatments and therapies for neurodevelopmental disorders.

With new computational and neuromodulatory approaches to interrogating brain networks, opportunities exist for “bedside-to bedside-translation” with a potentially shorter path to therapeutic options. Specifically, methods like lesion network mapping can identify brain networks involved in the generation of complex symptomatology, both from acute onset lesion-related symptoms and from focal developmental anomalies. Traditional neuroimaging can examine the generalizability of these findings to idiopathic populations, while non-invasive neuromodulation techniques such as transcranial magnetic stimulation provide the ability to do targeted activation or inhibition of these specific brain regions and networks. In parallel, real-time functional MRI neurofeedback also allow for endogenous neuromodulation of specific targets that may be out of reach for transcranial exogenous methods.

Discovery of novel neuroanatomical circuits for transdiagnostic symptoms and neuroimaging-based endophenotypes may now be feasible for neurodevelopmental disorders using data from cohorts with focal brain anomalies. These novel circuits, after validation in large-scale highly characterized research cohorts and tested prospectively using noninvasive neuromodulation and neurofeedback techniques, may represent a new pathway for symptom-based targeted therapy.

Background

At the intersection of computational neuroscience and developmental cognitive neuroscience are attempts to identify and characterize the brain structures, networks, and processes underlying the development of human behavior. In support of this goal, a variety of techniques have been used including analysis of genetically consistent clinical cohorts and knockout animal models, single cell recording during behavior in awake and behaving animals, and non-invasive neurophysiologic and neuroimaging methods in infants, children, and adolescents [1]. Because there are also so many levels of investigation, e.g., single gene expression, the activity of particular cell types, the synaptic interaction between neurons in the brain, the study of brain regions and the networks between them, as well as human and animal behavior, there are many paths to understand differences and alterations pertinent to human behavior, intelligence, and neurodevelopmental disorders [2].

Nonetheless, translation from discoveries found at the single gene level or from animal models does not always translate into human therapeutics. This is often attributed to the complexity of interactions and emergent properties that connect gene expression to human behavior [3,4,5]. However, a shorter logical “leap” is possible by connecting alterations at the whole brain or brain network level with differences in behavior or changes in human development. As such, the use of neurophysiologic and neuroimaging methods to identify correlational “endophenotypes” for particular diagnoses and phenotypes is a growing field of its own [6,7,8,9,10,11,12,13]. A subset of biomarkers in general, endophenotypes are quantitative biological traits that reflect the function of a discrete biological system, correlate with disease severity or susceptibility, and are reasonably heritable. As such, they are considered more closely related to the root cause of a disease than the behavioral/clinical phenotype itself [14].

The challenge of diagnostic and methodologic heterogeneity in correlational studies of neurodevelopmental disorders

Extending beyond the specific aim of identifying diagnostic endophenotypes for disorders, the bulk of neuroimaging in neurodevelopmental disorders has still focused on identifying any descriptive imaging-phenotype correlations by comparing affected cohorts [15,16,17], similar to the identification of genotype-phenotype correlations in genome-wide association studies (GWAS). For instance, the Simons Foundation Powering Autism Research (SPARK) study maintains a growing list of single genes and copy number variants (now at 167 single genes, 43 copy number variants, and 5 chromosomal variants) that are related to autism, many of which have specific genotype-phenotype patterns [18].

Over the past several years, however, it has become apparent that linking neurophysiological or neuroimaging findings to external behavioral phenotypes of a particular neurodevelopmental disorder is a significant challenge. This may be primarily due to lack of reproducibility [19] across studies using the typical sample size (N ~ 20–30) available to individual lab groups [20, 21], but may also be due to multiple sources of heterogeneity across conditions and methods. This has highlighted a need to (1) improve behavioral characterization and differentiation of clinical populations, e.g., “deep phenotyping” [8], (2) identify and reduce meaningful variation due to methodological choices [22], and (3) increase sample sizes to find reproducible and generalizable results through collaboration and consortia efforts [20]. Multiple efforts have already begun to fill each of these gaps, including the Adolescent Brain Cognitive Development (ABCD) project that will longitudinally study over 11,000 children as they progress through adolescence with behavioral, neurophysiological, and neuroimaging-based assessment [23], and the Brain Imaging Data Structure (BIDS) initiative, which seeks to develop an ecosystem of interoperable data and analysis pipelines for studying the brain [24, 25]. Multiple groups are also advancing consistent processing and statistical protocols to generate more reproducible results in neuroimaging and in neurophysiology [26,27,28].

However, even with the advancements noted above, this still represents a data-driven observational approach to identify statistical correlations and associations. This leads to an often-implicit assumption that with enough data, diagnosis-level biomarkers will emerge. This has been shown to be possible, but the findings that emerge from this type of analysis often have small effect sizes and may miss larger effects in specific subgroups due to group heterogeneity [29]. More importantly, these results are still correlational in nature—without perturbation or modulation, it is difficult to differentiate between findings that (1) represent endophenotypes or proximal causes for a behavioral phenotype, (2) are present because they are attempts to compensate for a behavioral phenotype, or (3) are present because they are downstream effects/biomarkers of some other cause.

A complementary strategy, however, may be to discard etiological or categorical diagnosis labels altogether, and focus purely on identifying the neuroanatomical basis for quantifiable, unidimensional symptoms or aspects of human behavior [30, 31]. Specifically, (1) focusing on individual symptoms across clinical cohorts, particularly those with focal brain injury, atrophy, or other focal brain alterations may provide region- or circuit-based hypotheses that are more likely to represent endophenotypes than observational/diagnosis association-based approaches, (2) traditional neuroimaging study of patients with neurodevelopmental disorders or analysis of large-scale highly characterized cohorts can then be performed in a more hypothesis-driven fashion, (3) if consistent, non-invasive neuromodulatory techniques can test whether these brain circuits can be easily modulated, and (4) if so, this pathway leads directly to clinical trials that test whether non-invasive modulation of these circuits results in measurable symptomatic changes at the group- and individual-level. It is my thesis that treatment targets generated in this fashion are significantly more likely to be effective than those generated from diagnosis-association approaches alone.

A “bedside-to-bedside” pathway to identify treatment targets for individual symptoms in neurodevelopmental disorders

Understanding the generation of specific symptoms may be a more direct approach to clinical utility

There is reason to believe that identifying the specific neuroanatomical/neurofunctional bases of specific unidimensional symptoms will enable the development of targeted therapies in a more rapid fashion than genetically informed drug targets for symptoms in autism spectrum disorder (ASD) and other neurodevelopmental disorders. For instance, patients with Parkinson’s disease have a mix of symptoms and co-morbidities that is nearly as heterogeneous as that in individuals with ASD: some Parkinson’s patients have a tremor, others have difficulty with gait, and yet others have depression or sleep disturbances [32]. These symptoms localize to various brain regions, and respond to different types of medication as well as to stimulation of different brain locations [33, 34]. Conversely, patients with different diseases but similar symptoms can respond to the same symptom-based treatment: (1) deep brain stimulation of the thalamus improves tremor symptoms in Parkinson’s disease and also essential tremor and (2) applying transcranial magnetic stimulation (TMS) to the dorsal lateral prefrontal cortex improves depression, independent of whether the depression is due to Parkinson’s disease or whether it represents a primary psychiatric illness [33]. This interventional approach is also consistent with a growing movement towards studying neuropsychiatric and neurodevelopmental disorders by focusing on specific symptoms, exemplified by the NIMH Research Domain Criteria (RDoC) initiative [31]. Applying this concept to individuals with ASD and other neurodevelopmental disorders would suggest that the observed heterogeneity in symptom burden across individuals may be due to the fact that each symptom is due to alteration of a different set of brain regions and networks. This could also explain the difficulty of identifying consistent findings across a group of individuals having a consistent diagnosis, but variable symptoms [15,16,17].

Brain lesions provide stronger causal inference for symptom generation

Fortunately, there is a longstanding tradition of using causal information to understand brain function in humans, traditionally by studying the natural history of patients after brain injury. In contrast to the correlations produced by traditional neuroimaging, new-onset brain lesions can provide a causal link between a damaged brain location and a resulting symptom [35, 36]. Specifically, careful study of individual cases of focal brain injury provides a unique view into how specific behaviors and components of human intelligence are affected when components of the brain’s network are impaired or removed. A significant portion of what we know about human brain function has historically been based on these findings and is of particular importance in clinical neurology, e.g., expressive aphasia from injury to Broca’s area [35, 37]. This approach has also been applied to pediatric stroke and brain injury in attempts to predict developmental outcomes, e.g., after perinatal stroke [38,39,40,41] as well as to computational models to provide unique insight into the criticality of different brain regions [42, 43]. While ASD and other neurodevelopmental disorders are distributed (i.e., non-lesional) conditions, the study of brain lesions that result in specific symptoms, e.g., post-stroke agitation and aggression [44], that are also seen in individuals with non-lesional conditions, represent a valuable strategy for localizing symptoms; such studies are advocated by several groups [45,46,47,48], and increasing evidence suggests that consistent brain regions and networks are involved across conditions [31, 49].

“Lesion network mapping” identifies brain networks that underlie complex lesion-induced symptoms

While examining lesion locations in individual patients provides significant insight, there are many reported cases where injury to multiple, distinct regions of the brain cause similar phenotypes, as well as the more common case that injury to singular regions of the brain produce a variety of disparate alterations in brain function, even in the same individual [50, 51]. It is now recognized that many brain functions (and thus many symptoms) do not localize to a single brain region, but rather depend on a circuit of connected areas [52]: a lesion to one of several regions within a circuit would lead to similar symptoms. While recent work has identified that lesions affecting “cortical hubs,” such as the default mode network, can produce widespread deficits, lesions affecting specialized networks are likely to produce deficits affecting a particular cognitive domain or function [53]. Extending this model further, it may be possible to identify specific brain circuits that are critical for the generation of specific symptoms by studying large collections of lesions with associated behavioral data; similar to how identifying multiple families with a consistent and specific phenotype can suggest a specific genetic alteration affecting a specific cellular pathway.

One computational neuroimaging method to interrogate the relationships between brain networks and phenotypes that is quickly gaining traction is “lesion network mapping” [50, 54, 55]. This method starts with a retrospective collection of patients with focal brain alterations, e.g., strokes, tumor resections, atrophy patterns, or neuromodulation, that are temporally associated with a particular change in behavioral phenotype. While it is difficult to prove causation in any single patient, the underlying assumption of this method is that if a brain network is consistently altered in affected patients with a consistent phenotype, or if the degree of network alteration correlates with the degree of behavioral phenotype, alterations of this network likely represent an endophenotype and should be considered more “causally” associated with symptom generation than any particular single lesion location. Evidence already suggests that such findings are relevant in non-lesioned patients as well [56].

The collated locations of brain alteration from each patient are then used as seeds for analyzing resting-state functional connectivity to understand which brain networks are affected by each focal lesion. While using post-injury resting state fMRI data from the patients themselves is useful in predicting outcomes, it is rarely available for most cohorts [57]. Instead, lesion network mapping leverages the availability of large-scale collections of resting state fMRI data from normative/typically developing participants [55]. This answers the question: “what brain network would be impacted by a lesion prior to any chronic compensation or plasticity?” This is analogous to comparing a patient’s specific mutation to a normative genome. Examples of these “normative connectomes” include using 1000 healthy participants from the Brain Genomics Superstruct Project (GSP) with an average age 21.5 ± 2.9 years [58] or 1000 typically developing participants from the Adolescent Brain Cognitive Development (ABCD) with an average age 9.2 ± 0.2 years [23]. The collection of normative network maps from each lesion can then be statistically compared to each person’s behavioral measures to identify which connections, when impaired, are consistently associated with symptom severity in a sensitive and specific way [54].

An additional benefit is that since only the structural MRI data are needed from patients to identify lesion locations, this technique is applicable to the wide range of neurodevelopmental and neuropsychiatric symptoms that can occur after brain injury. In fact, lesion network mapping has identified brain circuits for a number of distinct—and often complex—neuropsychiatric symptoms [54]. For instance, recent work leveraging data from 713 patients across 14 datasets found that a consistent and specific brain network, including the intraparietal sulcus, dorsolateral prefrontal cortex, inferior frontal gyrus, ventromedial prefrontal cortex, and subgenual cingulate cortex, was affected in patients with depression, i.e., lesions connected to this network were associated with increased depression, while TMS and DBS sites connected to this network were associated with improvement in depressive symptoms in patients without brain injury [59]. Other work has found specific network alterations associated with mania [60], hallucinations [61], and criminal behavior [62], as well as more focused neurological symptoms such as blindsight [63], freezing of gait [64], and cervical dystonia [56] among others. Finally, lesion network mapping has also been adapted to make sense of traditional neuroimaging findings where a large collection of related studies does not seem to converge well, e.g., meta-analyses of brain locations involved in migraine revealed multiple disparate and seemingly unrelated brain locations, but a coordinate network mapping approach of this same data identified that these brain locations were in fact part of a singular network defined by connectivity to extrastriate visual cortex [65].

Using lesion network mapping to identify networks that may be important in non-lesional neurodevelopmental disorders

This methodology is also particularly useful for choosing among multiple hypotheses where correlational approaches do not converge on a consensus neuroanatomical structure. One example of this is face recognition impairment [66]. As many as 40% of individuals with ASD have impaired or altered face-processing ability [67, 68] which significantly affects the development of social skills [69]. However, traditional correlational neuroimaging investigations studying participants with ASD have provided variable and contradictory results regarding which brain region or network is responsible for this difficulty [67, 70,71,72]. Since face recognition impairment can also be caused by focal brain injury, we applied lesion network mapping to identify brain circuits that, when disrupted, cause sudden-onset face recognition difficulty, i.e., acquired prosopagnosia [66]. This identified a circuit of brain regions positively connected to the right fusiform face area (FFA) [73] and negatively connected, i.e., have an inverse history of co-activation, to several regions of the left frontoparietal control network that are implicated in cognitive control, hierarchical task-set manipulation, and recognition of ambiguous visual stimuli [74,75,76,77]. Injury to these circuits also predicted subclinical facial agnosia in an independent dataset [66]. These regions are among a larger set of regions that have variably been reported in fMRI studies of ASD; however, the stronger linkage between damage to this particular network and specific loss of face recognition support a specific testable hypothesis. If studies of idiopathic ASD identify a relationship between impaired face processing and alterations of this same neuroanatomical circuit—which are currently underway—converging evidence would then suggest that this altered network represents an endophenotype of face processing in ASD and not simply a compensatory or correlational finding.

Focal cortical malformations and tuberous sclerosis complex may provide an opportunity for direct lesion network mapping of neurodevelopmental disorders

An important caveat of using acute-onset lesions, often in adults, for lesion network mapping is whether the identified circuits are also important for neurodevelopmental disorders, which are typically not associated with a history of stroke, nor with obvious neuroanatomical abnormalities. However, lesion network mapping has proven effective for postoperative cerebellar cognitive affective syndrome, one of the few specific post-stroke syndromes that primarily affect children [78]. To bridge this gap, identifying pediatric clinical cohorts with more subtle focal cortical alterations may be informative. One such cohort is children with tuberous sclerosis complex (TSC), which is characterized by focal cortical tubers that affect the function of the surrounding cortex and a high risk for developing ASD [79,80,81].

As one example of how lesion network mapping may provide insight into neurodevelopmental symptoms, we recently found that connectivity between cortical tubers and the subcortical globi pallidi is a strong predictor of infantile spasms, a sudden-onset epileptic syndrome that affects up to 55% of children with TSC and is strongly associated with poor neurological outcome if not treated rapidly [82,83,84,85]. This study sought to predict an epilepsy syndrome and did not directly focus on developmental outcomes. However, this finding suggests that the location and connectivity of cortical tubers and other focal neurodevelopmental anomalies may also be useful in identifying other brain networks critical for symptom generation in children with TSC. While there is reason to suspect that the neural abnormalities in TSC are not restricted solely to tuber locations [86, 87], prior studies have already suggested potential relationships between tuber location and neurodevelopmental outcomes, albeit with small sample sizes and non-computational, e.g., visual inspection/counting, approaches [88,89,90,91,92,93]. Moving forward, we have studies currently underway determining the relationship between tuber location and connectivity with face recognition ability and ASD-related symptoms in TSC using lesion network mapping and complementary approaches.

New neuromodulation methods allow for non-invasive direct testing of neuroanatomical hypotheses

New therapeutic approaches, such as non-invasive transcranial magnetic stimulation (TMS) and transcranial direct stimulation (tDCS), enable targeted exogenous stimulation, or suppression, of specific brain circuits, and have become an established technique for studying cognitive processes [94,95,96]. One of the attractions of non-invasive neuromodulation is that it fills an important methodological gap in our ability to study human cognition. Namely, while neuroimaging and neurophysiological techniques can identify changes in brain activity or connectivity correlated with a cognitive task or behavioral phenotype, they lack causal inference, as discussed above. Similarly, while lesion studies provide causal inference for the involvement of particular tasks in a cognitive task or behavioral phenotype, finding cases of damage to all regions of interest can be difficult and the extent and the mechanism of the lesion is not always consistent. TMS, tDCS, and other focused neuromodulation techniques sidestep these two limitations by allowing for direct manipulation of neural activity in any research participant with a reasonable spatial and temporal resolution [97].

Given these capabilities, TMS has been leveraged over the past two decades to explore a variety of cognitive processes including attention [98], learning [99], awareness [100], plasticity [101], language [102], and perception [103] where TMS to specific brain regions interrupts specific brain function, which can also be observed in real-time with fMRI [104]. TMS has also been explored specifically for biomarker development in ASD as it can measure intracortical inhibition, facilitation, and plasticity—all metrics found to be altered in models of ASD—through paired pulse and repetitive TMS paradigms. It has also proven useful in the study and treatment of numerous clinical applications, including movement disorders [105], epilepsy [106], Tourette syndrome [107], depression [108,109,110], obsessive compulsive disorder [111], schizophrenia [112], and the spectrum of generalized anxiety, posttraumatic stress, and bipolar disorders [113]. Trials are also already underway for TMS in autism, e.g., focusing on the right temporal-parietal junction (rTPJ) [114] and dorsolateral prefrontal cortex (DLPFC) [115] among others. However, as noted above, the evidence for “which” target to use is mixed and largely correlational and results thus far have been mixed.

Nonetheless, there are limitations to exogenous stimulation techniques that can make interpretation of these studies complicated. Specifically, while techniques such as TMS are often described as “injecting noise” into a particular region [96], or as creating a “virtual lesion” [95], the specific and complete effect of exogenous stimulation, or suppression, is still debated [116]. Similarly, it has also been proposed that some or all of the effect of focused neurostimulation may occur indirectly, through connections to a distributed network [117], a hypothesis that appears to be true in depression [110]. This has led to a rise in multi-location, “double-coil,” neuromodulation experiments, to assess how stimulation at one location modulates the activity of another [118, 119], and protocols that allow for the combination of TMS with positron emission tomography (PET), electroencephalography (EEG), or fMRI, to assess the network effects of neurostimulation in relatively real-time [120, 121], with some groups taking this further to combine TMS, fMRI, and EEG simultaneously [122].

From a clinical standpoint, while neurostimulation techniques have demonstrated clear therapeutic utility in a number of neuropsychiatric conditions; patients often have difficulty tolerating the stimulations, and their utility in patients with ASD, or indeed in pediatrics in general, may be limited [123,124,125] and developing alternative protocols or modalities for pediatric use is an active endeavor [126]. There may also be significant gains from taking advantage of the brain’s own neuromodulatory and mechanisms governing plasticity, and methods aiming towards endogenous modulation of the brain have been investigated for decades. While bio- and neurofeedback methods have traditionally focused on externally measured biological, or EEG-based, indicators that typically lack spatial specificity, recent technical advances now permit real-time monitoring and control of specific brain regions and networks via feedback that is obtained during fMRI [127,128,129,130,131]. However, even without spatial localization, neurofeedback paradigms may be effectively for specific symptoms in ASD, e.g., potentially improving components of executive function by reducing atypically heightened theta/beta ratios by inhibiting theta activation and enhancing beta activation [132].

Real-time fMRI neurofeedback

Real-time functional magnetic resonance imaging neurofeedback (rt-fMRI NF) was first piloted in 1995 [133] and has since become a small but rapidly developing field. Like exogenous neuromodulation techniques, rt-fMRI NF can also be used to examine the relationship of neural activity and cognitive functions and, at the same time, also serve as a clinical tool to mitigate a host of clinical symptoms. Neurofeedback based on rt-fMRI works by providing a training protocol that allows participants to voluntarily control their brain activity and/or measures of connectivity [128, 130, 134,135,136,137] as measured by fMRI as the BOLD response from a targeted region of interest (ROI), network of regions, or a computed difference between regions. The neurofeedback loop is closed when this brain activity or calculated measure is presented as a feedback signal to the participant being scanned in near real-time. Given the time lagged nature of the BOLD response, closed-loop times typically range from 2 to 10 seconds or can be presented at the end of task blocks [130, 138]. With the help of neurofeedback, participants can learn voluntary control over the own brain activity and connectivity with a goal of transfer to experimental situations without feedback and to, hopefully, generate long-term changes in brain activity and behavior. In fact, initial testing of rt-fMRI NF in ASD, e.g., to upregulate FFA activity [139], superior temporal sulcus activity [140], or to modulate “aberrant” brain connectivity [141], has already begun. As one example, Pereira et al. recently demonstrated with adolescents with ASD, as well as typically developing adolescents, that 2 sessions of rt-fMRI NF was sufficient to upregulate bilateral FFA baseline activity, with participants with ASD showing a larger increase, but was not associated with behavioral improvement—likely due to the brief intervention and short time scale of this feasibility study [139].

In addition to its use as an investigative tool, effective clinical use of rt-fMRI has emerged for such conditions as chronic pain [142], addiction [143, 144], stroke recovery [145], Parkinson’s disease [146], tinnitus [147], autism [141], depression [148], psychopathy [149], and emotional face processing in schizophrenia [150]. Unlike several methods noted above, rt-fMRI NF requires no external stimulation and can be utilized in all patients that can tolerate a standard task-based fMRI protocol [131]. Conversely, rt-fMRI NF is not going to be useful for patients with profound autism and children with significant developmental delay who cannot participate in a task paradigm, nor even hold still for long periods of time in an MRI machine. As such, it may usefully serve as both an option for children with less severe cognitive and sensory profiles as an alternative to TMS and as a platform for rapid proof-of-principle investigations that would then lead to TMS/tDCS protocols. It can also confirm whether modulating a particular hypothetical target modulates the network of interest in brain structures that would normally require deep brain stimulation to reach. Simultaneous EEG acquisition in these patients may also identify a signature that correlates with successful fMRI-guided neurofeedback, unlocking the possibility of targeted neurofeedback in younger children who cannot participate in rt-fMRI NF [151, 152]. New developments in fMRI, such as the use of VR and hyperscanning (where two participants can interact while being scanned in two different MR scanners at the same time) allow for highly immersive and interactive paradigms that may prove increasingly tolerable for pediatric participants and allow for investigation of social skills [153,154,155].

Conclusions

Over the past decade, significant efforts have been put into improving traditional cognitive neuroscience approaches to allow far more inference to be drawn from observational and correlational techniques. This has included the generation of large-scale datasets that are multiple orders of magnitude larger than previously available and a convergence with computational neuroscience approaches to better understand the heterogeneity inherent in these data. This is converging with a progressive standardization of experimental methods and a heightened level of “deep phenotyping” that allows for detection of small effect sizes in clinical populations. Now, the development of several paradigm-changing methods that with increased causal inference between alterations in brain structure and function with human behavior has the potential to provide not only new insight into typical brain development and neurodevelopmental disorders, but also an avenue for targeted therapy for specific symptoms, disabilities, and impairments.

I propose that significant progress can be made towards this goal by combining the techniques described here into an interactive pipeline of multimodal investigation. Specifically, (1) the generation of circuit-based hypotheses for individual symptoms and behaviors from clinical cohorts with lesions, tubers, tumor resections, and other focal brain alterations, (2) validation of these symptom localizations through prospective neuroimaging study of patients with neurodevelopmental disorders with similar symptoms and retrospective analysis of large-scale highly characterized cohorts, (3) testing whether these circuits can be modulated through non-invasive therapy, e.g., behavioral, rt-fMRI NF, or TMS/tDCS-based interventions, and (4) assessing whether non-invasive modulation of these circuits results in measurable changes at the group- and individual-level. This approach focuses directly on symptoms, cognitive processes, and behaviors in human participants and side-steps concerns regarding animal model face and construct validity [156], as well as the prolonged therapeutic pipeline in traditional bench-to-bedside translation [157]. As such, a paradigm of “bedside-to-bedside” translational research that identifies, validates, and assesses the efficacy of transdiagnostic treatment targets is both feasible and attractive for neurodevelopmental and neuropsychiatric disorders.

Availability of data and materials

Data sharing is not applicable to this article as no datasets were generated or analyzed during the current study.

Abbreviations

ASD:

Autism spectrum disorder

EEG:

Electroencephalography

FFA:

Fusiform face area

GWAS:

Genome-wide association studies

PET:

Positron emission tomography

RDoC:

Research Domain Criteria

rt-fMRI NF:

Real-time functional magnetic resonance imaging neurofeedback

tDCS:

Transcranial direct current stimulation

TMS:

Transcranial magnetic stimulation

TSC:

Tuberous sclerosis complex

References

  1. Klapwijk ET, van den Bos W, Tamnes CK, Raschle NM, Mills KL. Opportunities for increased reproducibility and replicability of developmental neuroimaging. Dev Cogn Neurosci. 2021;47:100902.

    Article  PubMed  Google Scholar 

  2. Sejnowski TJ, Christof K, Churchland PS. Computational neuroscience. Science. 1988;241:1299–306 American Association for the Advancement of Science.

    Article  CAS  PubMed  Google Scholar 

  3. Nelson MR, Tipney H, Painter JL, Shen J, Nicoletti P, Shen Y, et al. The support of human genetic evidence for approved drug indications. Nat Genet. 2015;47:856–60.

    Article  CAS  PubMed  Google Scholar 

  4. Seyhan AA. Lost in translation: the valley of death across preclinical and clinical divide – identification of problems and overcoming obstacles. Transl Med Commun. 2019;4:18.

    Article  Google Scholar 

  5. King EA, Davis JW, Degner JF. Are drug targets with genetic support twice as likely to be approved? Revised estimates of the impact of genetic support for drug mechanisms on the probability of drug approval. Marchini J, editor. PLoS Genet. 2019;15:e1008489.

    Article  PubMed  PubMed Central  Google Scholar 

  6. Kharabian Masouleh S, Eickhoff SB, Hoffstaedter F, Genon S. Alzheimer’s disease neuroimaging initiative. Empirical examination of the replicability of associations between brain structure and psychological variables. eLife. 2019;8:e43464.

    Article  PubMed  PubMed Central  Google Scholar 

  7. Drysdale AT, Grosenick L, Downar J, Dunlop K, Mansouri F, Meng Y, et al. Resting-state connectivity biomarkers define neurophysiological subtypes of depression. Nat Med. 2017;23:28–38.

    Article  CAS  PubMed  Google Scholar 

  8. Dinga R, Schmaal L, Penninx BWJH, van Tol MJ, Veltman DJ, van Velzen L, et al. Evaluating the evidence for biotypes of depression: Methodological replication and extension of. NeuroImage: Clin. 2019;22:101796.

    Article  Google Scholar 

  9. Boekel W, Wagenmakers E-J, Belay L, Verhagen J, Brown S, Forstmann BU. A purely confirmatory replication study of structural brain-behavior correlations. Cortex. 2015;66:115–33.

    Article  PubMed  Google Scholar 

  10. Constantino JN. Deconstructing autism: from unitary syndrome to contributory developmental endophenotypes. Int Rev Psychiatry. 2018;30:18–24.

    Article  PubMed  PubMed Central  Google Scholar 

  11. Kendler KS, Neale MC. Endophenotype: a conceptual analysis. Mol Psychiatry. 2010;15:789–97.

    Article  PubMed  PubMed Central  Google Scholar 

  12. Gottesman II, Gould TD. The endophenotype concept in psychiatry: etymology and strategic intentions. AJP. 2003;160:636–45.

    Article  Google Scholar 

  13. Mahajan R, Mostofsky SH. Neuroimaging endophenotypes in autism spectrum disorder. CNS Spectr. 2015;20:412–26.

    Article  PubMed  PubMed Central  Google Scholar 

  14. Wong EHF, Fox JC, Ng MYM, Lee C-M. Toward personalized medicine in the neuropsychiatric field. In: International Review of Neurobiology. USA: Elsevier; 2011. p. 329–49. [cited 2021 Dec 31]. Available from: https://linkinghub.elsevier.com/retrieve/pii/B9780123877185000134.

  15. Pelphrey KA, Shultz S, Hudac CM, Vander Wyk BC. Research review: Constraining heterogeneity: the social brain and its development in autism spectrum disorder. J Child Psychol Psychiatry Allied Discip. 2011;52:631–44.

    Article  Google Scholar 

  16. Loth E, Spooren W, Ham LM, Isaac MB, Auriche-Benichou C, Banaschewski T, et al. Identification and validation of biomarkers for autism spectrum disorders. Nat Rev Drug Discov. 2016;15(1):70-3. https://doi.org/10.1038/nrd.2015.7.

  17. Lenroot RK, Yeung PK. Heterogeneity within autism spectrum disorders: what have we learned from neuroimaging studies? Front Hum Neurosci Switzerland. 2013;7:733.

    Google Scholar 

  18. SPARK Consortium. Electronic address: pfeliciano@simonsfoundation.org, SPARK Consortium. SPARK. A US Cohort of 50,000 Families to Accelerate Autism Research. Neuron. 2018;97:488–93.

    Article  Google Scholar 

  19. Ioannidis JPA, Munafò MR, Fusar-Poli P, Nosek BA, David SP. Publication and other reporting biases in cognitive sciences: detection, prevalence, and prevention. Trends Cogn Sci. 2014;18:235–41.

    Article  PubMed  PubMed Central  Google Scholar 

  20. Button KS, Ioannidis JPA, Mokrysz C, Nosek BA, Flint J, Robinson ESJ, et al. Power failure: why small sample size undermines the reliability of neuroscience. Nat Rev Neurosci. 2013;14:365–76.

    Article  CAS  PubMed  Google Scholar 

  21. Szucs D, Ioannidis JPA. Sample size evolution in neuroimaging research: an evaluation of highly-cited studies (1990–2012) and of latest practices (2017–2018) in high-impact journals. NeuroImage. 2020;221:117164.

    Article  PubMed  Google Scholar 

  22. Botvinik-Nezer R, Holzmeister F, Camerer CF, Dreber A, Huber J, Johannesson M, et al. Variability in the analysis of a single neuroimaging dataset by many teams. Nature. 2020;582:84–8.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Volkow ND, Koob GF, Croyle RT, Bianchi DW, Gordon JA, Koroshetz WJ, et al. The conception of the ABCD study: from substance use to a broad NIH collaboration. Dev Cogn Neurosci. 2018;32:4–7.

    Article  PubMed  Google Scholar 

  24. Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, et al. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Scientific Data. 2016;3:160044 Nature Publishing Group.

    Article  PubMed  PubMed Central  Google Scholar 

  25. Gorgolewski K, Alfaro-Almagro F, Auer T, Bellec P, Capotă M, Chakravarty M, et al. BIDS Apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. Schneidman D, editor. PLoS Comput Biol. 2017;13(3):e1005209. https://doi.org/10.1371/journal.pcbi.1005209. eCollection 2017 Mar.

  26. Esteban O, Markiewicz CJ, Blair RW, Moodie CA, Isik AI, Erramuzpe A, et al. fMRIPrep: a robust preprocessing pipeline for functional MRI. Nat Methods. 2019;16:111–6 Cold Spring Harbor Laboratory.

    Article  CAS  PubMed  Google Scholar 

  27. Levin AR, Méndez Leal AS, Gabard-Durnam LJ, O’Leary HM. BEAPP: The batch electroencephalography automated processing platform. Front Neurosci. 2018;12:513.

    Article  PubMed  PubMed Central  Google Scholar 

  28. Gabard-Durnam LJ, Mendez Leal AS, Wilkinson CL, Levin AR. The Harvard Automated Processing Pipeline for Electroencephalography (HAPPE): standardized processing software for developmental and high-artifact data. Front Neurosci. 2018;12:97.

    Article  PubMed  PubMed Central  Google Scholar 

  29. Marek S, Tervo-Clemmens B, Calabro FJ, Montez DF, Kay BP, Hatoum AS, et al. Towards reproducible brain-wide association studieS. bioRxiv. 2020;2020(08):21.257758 Cold Spring Harbor Laboratory.

    Google Scholar 

  30. Insel T, Cuthbert B, Garvey M, Heinssen R, Pine DS, Quinn K, et al. Research Domain Criteria (RDoC): toward a new classification framework for research on mental disorders. Am J Psychiatry. 2010;167:748–51.

    Article  PubMed  Google Scholar 

  31. Cuthbert BN, Insel TR. Toward the future of psychiatric diagnosis: the seven pillars of RDoC. BMC Med. 2013;11:126.

    Article  PubMed  PubMed Central  Google Scholar 

  32. Garcia-Ruiz PJ, Chaudhuri KR, Martinez-Martin P. Non-motor symptoms of Parkinson’s disease a review. from the past. J Neurol Sci. 2014;338(1-2):30-3. https://doi.org/10.1016/j.jns.2014.01.002.

  33. Fregni F, Santos CM, Myczkowski ML, Rigolino R, Gallucci-Neto J, Barbosa ER, et al. Repetitive transcranial magnetic stimulation is as effective as fluoxetine in the treatment of depression in patients with Parkinson’s disease. J Neurol Neurosurg Psychiatry. 2004;75:1171–4.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Fox MD, Buckner RL, Liu H, Chakravarty MM, Lozano AM, Pascual-Leone A. Resting-state networks link invasive and noninvasive brain stimulation across diverse psychiatric and neurological diseases. Proc Natl Acad Sci. 2014;111:E4367–75.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  35. Rorden C, Karnath HO. Using human brain lesions to infer function: a relic from a past era in the fMRI age? Nat Rev Neurosci. 2004;5:812–9.

    Article  CAS  Google Scholar 

  36. Rorden C, Karnath HO, Bonilha L. Improving lesion-symptom mapping. J Cogn Neurosci. 2007;19:1081–8.

    Article  PubMed  Google Scholar 

  37. Brazis PW, Masdeu JC, Biller J. Localization in clinical neurology. 7th ed. Philadelphia: Wolters Kluwer; 2017.

    Google Scholar 

  38. Malone LA, Felling RJ. Pediatric stroke: unique implications of the immature brain on injury and recovery. Pediatr Neurol. 2020;102:3–9.

    Article  PubMed  Google Scholar 

  39. Giudice C, Rogers EE, Johnson BC, Glass HC, Shapiro KA. Neuroanatomical correlates of sensory deficits in children with neonatal arterial ischemic stroke. Dev Med Child Neurol. 2019;61:667–71.

    Article  PubMed  Google Scholar 

  40. Fluss J, Dinomais M, Chabrier S. Perinatal stroke syndromes: similarities and diversities in aetiology, outcome and management. Eur J Paediatr Neurol. 2019;23:368–83.

    Article  PubMed  Google Scholar 

  41. Tillema J. Reprint of “Cortical reorganization of language functioning following perinatal left MCA stroke” [Brain and Language 105 (2008) 99–111]. Brain Lang. 2008;106:184–94.

    Article  PubMed  Google Scholar 

  42. Baldissera F, Kernell D. Introductory comments to the symposium “Excitation-to-frequency transduction in mammalian neurones.”. Arch Ital Biol. 1984;122:3–4.

    CAS  PubMed  Google Scholar 

  43. Falcon MI, Riley JD, Jirsa V, McIntosh AR, Shereen AD, Chen EE, et al. The virtual brain: modeling biological correlates of recovery after chronic stroke. Front Neurol. 2015;6:228.

    Article  PubMed  PubMed Central  Google Scholar 

  44. Tang WK, Liu XX, Liang H, Chen YK, Chu WCW, Ahuja AT, et al. Location of acute infarcts and agitation and aggression in stroke. J Neuropsychiatry Clin Neurosci. 2017;29:172–8.

    Article  PubMed  Google Scholar 

  45. Sweeten TL, Posey DJ, Shekhar A, McDougle CJ. The amygdala and related structures in the pathophysiology of autism. Pharmacol Biochem Behav. 2002;71:449–55.

    Article  CAS  PubMed  Google Scholar 

  46. Hillis AE. Inability to empathize: brain lesions that disrupt sharing and understanding another’s emotions. Brain. 2014;137:981–97.

    Article  PubMed  Google Scholar 

  47. Herbet G, Lafargue G, Moritz-Gasser S, Menjot de Champfleur N, Costi E, Bonnetblanc F, et al. A disconnection account of subjective empathy impairments in diffuse low-grade glioma patients. Neuropsychologia. 2015;70:165–76.

    Article  PubMed  Google Scholar 

  48. Stoodley CJ, Limperopoulos C. Structure–function relationships in the developing cerebellum: evidence from early-life cerebellar injury and neurodevelopmental disorders. Semin Fetal Neonatal Med. 2016;21(5):356-64.

  49. Ecker C, Bookheimer SY, Murphy DGM. Neuroimaging in autism spectrum disorder: brain structure and function across the lifespan. Lancet Neurol England. 2015;14:1121–34.

    Article  Google Scholar 

  50. Boes AD, Prasad S, Liu H, Liu Q, Pascual-Leone A, Caviness VS, et al. Network localization of neurological symptoms from focal brain lesions. Brain. 2015;138:3061–75.

    Article  PubMed  PubMed Central  Google Scholar 

  51. Corbetta M, Ramsey L, Callejas A, Baldassarre A, Hacker CD, Siegel JS, et al. Common behavioral clusters and subcortical anatomy in stroke. Neuron. 2015;85:927–41 Elsevier.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  52. Fornito A, Zalesky A, Breakspear M. The connectomics of brain disorders. Nat Rev Neurosci England. 2015;16:159–72.

    Article  CAS  Google Scholar 

  53. Warren DE, Power JD, Bruss J, Denburg NL, Waldron EJ, Sun H, et al. Network measures predict neuropsychological outcome after brain injury. Proc Natl Acad Sci U S A. 2014;111:14247–52.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  54. Fox MD. Mapping symptoms to brain networks with the human connectome. N Engl J Med. 2018;379:2237–45.

    Article  CAS  PubMed  Google Scholar 

  55. Cohen AL, Fox MD. Reply: The influence of sample size and arbitrary statistical thresholds in lesion-network mapping. Brain Oxford Academic. 2020;143:e41.

    Google Scholar 

  56. Corp DT, Joutsa J, Darby RR, Delnooz CCS, van de Warrenburg BPC, Cooke D, et al. Network localization of cervical dystonia based on causal brain lesions. Brain. 2019;142:1660–74.

    Article  PubMed  PubMed Central  Google Scholar 

  57. Siegel JS, Ramsey LE, Snyder AZ, Metcalf NV, Chacko RV, Weinberger K, et al. Disruptions of network connectivity predict impairment in multiple behavioral domains after stroke. PNAS. 2016;113:E4367–76 National Academy of Sciences.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  58. Cohen AL, Soussand L, McManus P, Fox M. GSP1000 Preprocessed Connectome: Harvard Dataverse; 2020. [cited 2021 Apr 2]. Available from: https://dataverse.harvard.edu/citation?persistentId=doi:10.7910/DVN/ILXIKS

    Google Scholar 

  59. Siddiqi S, Schaper F, Horn A, Hsu J, Padmanabhan J, Brodtmann A, et al. Convergent causal mapping of neuropsychiatric symptoms using invasive brain stimulation, noninvasive brain stimulation, and lesions. Biol Psychiatry. 2021;89:S99–100.

    Article  Google Scholar 

  60. Cotovio G, Talmasov D, Barahona-Corrêa JB, Hsu J, Senova S, Ribeiro R, et al. Mapping mania symptoms based on focal brain damage. J Clin Invest. 2020;130(10):5209-22.

  61. Kim NY, Hsu J, Talmasov D, Joutsa J, Soussand L, Wu O, et al. Lesions causing hallucinations localize to one common brain network. Mol Psychiatry. 2021;26:1299–309.

    Article  PubMed  Google Scholar 

  62. Darby RR, Horn A, Cushman F, Fox MD. Lesion network localization of criminal behavior. PNAS. 2018;115:601–6.

    Article  CAS  PubMed  Google Scholar 

  63. Kletenik I, Ferguson MA, Bateman JR, Cohen AL, Lin C, Tetreault A, et al. Network localization of unconscious visual perception in blindsight. Ann Neurol. 2022;91(2):217-24.

  64. Fasano A, Laganiere SE, Lam S, Fox MD. Lesions causing freezing of gait localize to a cerebellar functional network. Ann Neurol. 2017;81:129–41.

    Article  PubMed  PubMed Central  Google Scholar 

  65. Burke MJ, Joutsa J, Cohen AL, Soussand L, Cooke D, Burstein R, et al. Mapping migraine to a common brain network. Brain. 2020;143:541–53.

    Article  PubMed  PubMed Central  Google Scholar 

  66. Cohen AL, Soussand L, Corrow SL, Martinaud O, Barton JJS, Fox MD. Looking beyond the face area: lesion network mapping of prosopagnosia. Brain. 2019;142:3975–90 Oxford University Press (OUP).

    Article  PubMed  PubMed Central  Google Scholar 

  67. Harms MB, Martin A, Wallace GL. Facial emotion recognition in autism spectrum disorders: a review of behavioral and neuroimaging studies. Neuropsychol Rev. 2010;20:290–322.

    Article  PubMed  Google Scholar 

  68. Zagury-Orly I, Kroeck MR, Soussand L, Cohen AL. Face-processing performance is an independent predictor of social affect as measured by the autism diagnostic observation schedule across large-scale datasets. J Autism Dev Disord. 2022;52(2):674-88.

  69. Corbett BA, Newsom C, Key AP, Qualls LR, Edmiston EK. Examining the relationship between face processing and social interaction behavior in children with and without autism spectrum disorder. J Neurodev Disord. 2014;6(1):35.

  70. Nomi JS, Uddin LQ. Face processing in autism spectrum disorders: from brain regions to brain networks. Neuropsychologia. 2015;71:201–16.

    Article  PubMed  PubMed Central  Google Scholar 

  71. Weigelt S, Koldewyn K, Kanwisher N. Face recognition deficits in autism spectrum disorders are both domain specific and process specific. Pavlova M, editor. PLoS One. 2013;8:e74541.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  72. Bookheimer SY, Wang AT, Scott A, Sigman M, Dapretto M. Frontal contributions to face processing differences in autism: evidence from fMRI of inverted face processing. J Int Neuropsychol Soc. 2008;14:922–32.

    Article  PubMed  PubMed Central  Google Scholar 

  73. Kanwisher N, Yovel G. The fusiform face area: a cortical region specialized for the perception of faces. Philosophical Trans R Soc B: Biol Sci. 2006;361:2109–28.

    Article  Google Scholar 

  74. Dosenbach NUF, Fair DA, Miezin FM, Cohen AL, Wenger KK, Dosenbach RAT, et al. Distinct brain networks for adaptive and stable task control in humans. Proc Natl Acad Sci U S A. 2007;104:11073–8.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  75. Crone EA, Wendelken C, Donohue SE, Bunge SA. Neural evidence for dissociable components of task-switching. Cereb Cortex. 2006;16:475–86.

    Article  PubMed  Google Scholar 

  76. Farooqui AA, Mitchell D, Thompson R, Duncan J. Hierarchical organization of cognition reflected in distributed frontoparietal activity. J Neurosci. 2012;32:17373–81.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  77. Ramnani N, Owen AM. Anterior prefrontal cortex: insights into function from anatomy and neuroimaging. Nat Rev Neurosci. 2004;5:184–94 Nature Publishing Group.

    Article  CAS  PubMed  Google Scholar 

  78. Albazron FM, Bruss J, Jones RM, Yock TI, Pulsifer MB, Cohen AL, et al. Pediatric postoperative cerebellar cognitive affective syndrome follows outflow pathway lesions. Neurology. 2019;93:E1561–71.

    Article  PubMed  PubMed Central  Google Scholar 

  79. Capal JK, Williams ME, Pearson DA, Kissinger R, Horn PS, Murray D, et al. Profile of autism spectrum disorder in tuberous sclerosis complex: results from a longitudinal, prospective, multisite study. Ann Neurol. 2021;90(6):874-86.

  80. Curatolo P, Moavero R, de Vries PJ. Neurological and neuropsychiatric aspects of tuberous sclerosis complex. Lancet Neurol. 2015;14:733–45.

    Article  PubMed  Google Scholar 

  81. Davis PE, Filip-Dhima R, Sideridis G, Peters JM, Au KS, Northrup H, et al. Presentation and diagnosis of tuberous sclerosis complex in infants. Pediatrics. 2017;140:e20164040.

    Article  PubMed  Google Scholar 

  82. Cohen AL, Mulder BPF, Prohl AK, Soussand L, Davis P, Kroeck MR, et al. Tuber locations associated with infantile spasms map to a common brain network. Ann Neurol. 2021;89(4):726–39.

  83. Jeste SS, Varcin KJ, Hellemann GS, Gulsrud AC, Bhatt R, Kasari C, et al. Symptom profiles of autism spectrum disorder in tuberous sclerosis complex. Neurology. 2016;87:766–72.

    Article  PubMed  PubMed Central  Google Scholar 

  84. Kotulska K, Kwiatkowski DJ, Curatolo P, Weschke B, Riney K, Jansen F, et al. Prevention of epilepsy in infants with tuberous sclerosis complex in the EPISTOP trial. Ann Neurol. 2020;n/a[cited 2020 Dec 2]. Available from: https://onlinelibrary.wiley.com/doi/abs/10.1002/ana.25956.

  85. Jansen FE, Vincken KL, Algra A, Anbeek P, Braams O, Nellist M, et al. Cognitive impairment in tuberous sclerosis complex is a multifactorial condition. Neurology. 2008;70:916.

    Article  CAS  PubMed  Google Scholar 

  86. Makki MI, Chugani DC, Janisse J, Chugani HT. Characteristics of abnormal diffusivity in normal-appearing white matter investigated with diffusion tensor MR imaging in tuberous sclerosis complex. Am J Neuroradiol. 2007;28:1662–7.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  87. Peters JM, Prohl AK, Tomas-Fernandez XK, Taquet M, Scherrer B, Prabhu SP, et al. Tubers are neither static nor discrete: evidence from serial diffusion tensor imaging. Neurology. 2015;85:1536–45.

    Article  PubMed  PubMed Central  Google Scholar 

  88. Bolton PF, Griffiths PD. Association of tuberous sclerosis of temporal lobes with autism and atypical autism. Lancet. 1997;349:392–5.

    Article  CAS  PubMed  Google Scholar 

  89. Weber AM, Egelhoff JC, McKellop JM, Franz DN. Autism and the cerebellum: evidence from tuberous sclerosis. J Autism Dev Disord. 2000;30:511–7.

    Article  CAS  PubMed  Google Scholar 

  90. Sundberg M, Sahin M. Cerebellar development and autism spectrum disorder in tuberous sclerosis complex. J Child Neurol. 2015;30:1954–62.

    Article  PubMed  PubMed Central  Google Scholar 

  91. Bolton PF, Park RJ, Higgins JNP, Griffiths PD, Pickles A. Neuro-epileptic determinants of autism spectrum disorders in tuberous sclerosis complex. Brain. 2002;125:1247–55.

    Article  PubMed  Google Scholar 

  92. Chou I-J, Lin K-L, Wong AM, Wang H-S, Chou M-L, Hung P-C, et al. Neuroimaging correlation with neurological severity in tuberous sclerosis complex. Eur J Paediatr Neurol. 2008;12:108–12.

    Article  PubMed  Google Scholar 

  93. Walz NC, Byars AW, Egelhoff JC, Franz DN. Supratentorial tuber location and autism in tuberous sclerosis complex. J Child Neurol. 2002;17:830–2.

    Article  PubMed  Google Scholar 

  94. Chambers CD, Mattingley JB. Neurodisruption of selective attention: insights and implications. Trends Cogn Sci. 2005;9:542–50.

    Article  PubMed  Google Scholar 

  95. Pascual-Leone A, Bartres-Faz D, Keenan JP. Transcranial magnetic stimulation: studying the brain-behaviour relationship by induction of “virtual lesions.”. Philos Trans R Soc Lond B Biol Sci. 1999;354:1229–38.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  96. Walsh V, Cowey A. Transcranial magnetic stimulation and cognitive neuroscience. Nat Rev Neurosci. 2000;1:73–9.

    Article  CAS  PubMed  Google Scholar 

  97. Wagner T, Valero-Cabre A, Pascual-Leone A. Noninvasive human brain stimulation. Annu Rev Biomed Eng. 2007;9:527–65.

    Article  CAS  PubMed  Google Scholar 

  98. Ashbridge E, Walsh V, Cowey A. Temporal aspects of visual search studied by transcranial magnetic stimulation. Neuropsychologia. 1997;35:1121–31.

    Article  CAS  PubMed  Google Scholar 

  99. Pascual-Leone A, Grafman J, Hallett M. Modulation of cortical motor output maps during development of implicit and explicit knowledge. Science. 1994;263:1287–9.

    Article  CAS  PubMed  Google Scholar 

  100. Cowey A, Walsh V. Magnetically induced phosphenes in sighted, blind and blindsighted observers. Neuroreport. 2000;11:3269–73.

    Article  CAS  PubMed  Google Scholar 

  101. Stefan K, Kunesch E, Cohen LG, Benecke R, Classen J. Induction of plasticity in the human motor cortex by paired associative stimulation. Brain. 2000;123(Pt 3):572–84.

    Article  PubMed  Google Scholar 

  102. Epstein CM. Transcranial magnetic stimulation: language function. J Clin Neurophysiol. 1998;15:325–32.

    Article  CAS  PubMed  Google Scholar 

  103. Zangaladze A, Epstein CM, Grafton ST, Sathian K. Involvement of visual cortex in tactile discrimination of orientation. Nature. 1999;401:587–90.

    Article  CAS  PubMed  Google Scholar 

  104. Bergmann TO, Varatheeswaran R, Hanlon CA, Madsen KH, Thielscher A, Siebner HR. Concurrent TMS-fMRI for causal network perturbation and proof of target engagement. NeuroImage. 2021;237:118093.

    Article  PubMed  Google Scholar 

  105. Cunnington R, Iansek R, Thickbroom GW, Laing BA, Mastaglia FL, Bradshaw JL, et al. Effects of magnetic stimulation over supplementary motor area on movement in Parkinson’s disease. Brain. 1996;119(Pt 3):815–22.

    Article  PubMed  Google Scholar 

  106. Caramia MD, Gigli G, Iani C, Desiato MT, Diomedi M, Palmieri MG, et al. Distinguishing forms of generalized epilepsy using magnetic brain stimulation. Electroencephalogr Clin Neurophysiol. 1996;98:14–9.

    Article  CAS  PubMed  Google Scholar 

  107. Ziemann U, Paulus W, Rothenberger A. Decreased motor inhibition in Tourette’s disorder: evidence from transcranial magnetic stimulation. Am J Psychiatry. 1997;154:1277–84.

    Article  CAS  PubMed  Google Scholar 

  108. Perera T, George MS, Grammer G, Janicak PG, Pascual-Leone A, Wirecki TS. The clinical TMS society consensus review and treatment recommendations for TMS therapy for major depressive disorder. Brain Stimul. 2016;9:336–46.

    Article  PubMed  PubMed Central  Google Scholar 

  109. Johnson KA, Baig M, Ramsey D, Lisanby SH, Avery D, McDonald WM, et al. Prefrontal rTMS for treating depression: location and intensity results from the OPT-TMS multi-site clinical trial. Brain Stimul. 2013;6:108–17.

    Article  PubMed  Google Scholar 

  110. Siddiqi SH, Taylor SF, Cooke D, Pascual-Leone A, George MS, Fox MD. Distinct symptom-specific treatment targets for circuit-based neuromodulation. AJP. 2020;177:435–46.

    Article  Google Scholar 

  111. Greenberg BD, George MS, Martin JD, Benjamin J, Schlaepfer TE, Altemus M, et al. Effect of prefrontal repetitive transcranial magnetic stimulation in obsessive-compulsive disorder: a preliminary study. Am J Psychiatry. 1997;154:867–9.

    Article  CAS  PubMed  Google Scholar 

  112. Sommer IEC, Slotema CW, Daskalakis ZJ, Derks EM, Blom JD, van der Gaag M. The treatment of hallucinations in schizophrenia spectrum disorders. Schizophr Bull. 2012;38:704–14.

    Article  PubMed  PubMed Central  Google Scholar 

  113. Kozel FA. Clinical repetitive transcranial magnetic stimulation for posttraumatic stress disorder, generalized anxiety disorder, and bipolar disorder. Psychiatr Clin North Am. 2018;41:433–46.

    Article  PubMed  Google Scholar 

  114. Enticott PG, Barlow K, Guastella AJ, Licari MK, Rogasch NC, Middeldorp CM, et al. Repetitive transcranial magnetic stimulation (rTMS) in autism spectrum disorder: protocol for a multicentre randomised controlled clinical trial. BMJ Open. 2021;11:e046830.

    Article  PubMed  PubMed Central  Google Scholar 

  115. Ameis SH, Blumberger DM, Croarkin PE, Mabbott DJ, Lai M-C, Desarkar P, et al. Treatment of Executive Function Deficits in autism spectrum disorder with repetitive transcranial magnetic stimulation: a double-blind, sham-controlled, pilot trial. Brain Stimul. 2020;13:539–47.

    Article  PubMed  PubMed Central  Google Scholar 

  116. Harris JA, Clifford CWG, Miniussi C. The functional effect of transcranial magnetic stimulation: signal suppression or neural noise generation? J Cogn Neurosci. 2008;20:734–40.

    Article  PubMed  Google Scholar 

  117. Lomber SG. The advantages and limitations of permanent or reversible deactivation techniques in the assessment of neural function. J Neurosci Methods. 1999;86:109–17.

    Article  CAS  PubMed  Google Scholar 

  118. Koch G, Fernandez Del Olmo M, Cheeran B, Schippling S, Caltagirone C, Driver J, et al. Functional interplay between posterior parietal and ipsilateral motor cortex revealed by twin-coil transcranial magnetic stimulation during reach planning toward contralateral space. J Neurosci. 2008;28:5944–53.

    Article  PubMed  PubMed Central  Google Scholar 

  119. Silvanto J, Lavie N, Walsh V. Stimulation of the human frontal eye fields modulates sensitivity of extrastriate visual cortex. J Neurophysiol. 2006;96:941–5.

    Article  PubMed  Google Scholar 

  120. Ruff CC, Driver J, Bestmann S. Combining TMS and fMRI: from “virtual lesions” to functional-network accounts of cognition. Cortex. 2009;45:1043–9.

    Article  PubMed  Google Scholar 

  121. Paus T. Inferring causality in brain images: a perturbation approach. Philos Trans R Soc Lond B Biol Sci. 2005;360:1109–14.

    Article  PubMed  PubMed Central  Google Scholar 

  122. Peters JC, Reithler J, Graaf TA d, Schuhmann T, Goebel R, Sack AT. Concurrent human TMS-EEG-fMRI enables monitoring of oscillatory brain state-dependent gating of cortico-subcortical network activity. Commun Biol. 2020;3:40.

    Article  PubMed  PubMed Central  Google Scholar 

  123. Burt T, Lisanby SH, Sackeim HA. Neuropsychiatric applications of transcranial magnetic stimulation: a meta analysis. Int J Neuropsychopharmacol. 2002;5:73–103 Oxford Academic.

    Article  PubMed  Google Scholar 

  124. Rossini PM, Burke D, Chen R, Cohen LG, Daskalakis Z, Di Iorio R, et al. Non-invasive electrical and magnetic stimulation of the brain, spinal cord, roots and peripheral nerves: Basic principles and procedures for routine clinical and research application. An updated report from an I.F.C.N. Committee. Clin Neurophysiol. 2015;126:1071–107.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  125. Wassermann EM, Lisanby SH. Therapeutic application of repetitive transcranial magnetic stimulation: a review. Clin Neurophysiol. 2001;112:1367–77.

    Article  CAS  PubMed  Google Scholar 

  126. Lewis YD, Gallop L, Campbell IC, Schmidt U. Effects of non-invasive brain stimulation in children and young people with psychiatric disorders: a protocol for a systematic review. Syst Rev. 2021;10:76.

    Article  PubMed  PubMed Central  Google Scholar 

  127. Bodurka J. 143. Amygdala emotional regulation training with real-time fMRI neurofeedback and concurrent EEG recordings. Biol Psychiatry. 2018;83:S58 Elsevier.

    Article  Google Scholar 

  128. Stoeckel LE, Garrison KA, Ghosh SS, Wighton P, Hanlon CA, Gilman JM, et al. Optimizing real time fMRI neurofeedback for therapeutic discovery and development. NeuroImage: Clin. 2014;5:245–55.

    Article  CAS  Google Scholar 

  129. Young KD, Siegle GJ, Misaki M, Zotev V, Phillips R, Drevets WC, et al. Altered task-based and resting-state amygdala functional connectivity following real-time fMRI amygdala neurofeedback training in major depressive disorder. NeuroImage: Clin. 2018;17:691–703.

    Article  Google Scholar 

  130. Sitaram R, Ros T, Stoeckel L, Haller S, Scharnowski F, Lewis-Peacock J, et al. Closed-loop brain training: the science of neurofeedback. Nat Rev Neurosci. 2017;18:86–100 Nature Publishing Group.

    Article  CAS  PubMed  Google Scholar 

  131. Watanabe T, Sasaki Y, Shibata K, Kawato M. Advances in fMRI real-time neurofeedback. Trends Cogn Sci. 2017;21:997–1010.

    Article  PubMed  PubMed Central  Google Scholar 

  132. Kouijzer MEJ, de Moor JMH, Gerrits BJL, Congedo M, van Schie HT. Neurofeedback improves executive functioning in children with autism spectrum disorders. Res Autism Spectr Disord. 2009;3:145–62.

    Article  Google Scholar 

  133. Cox RW, Jesmanowicz A, Hyde JS. Real-time functional magnetic resonance imaging. Magn Reson Med. 1995;33:230–6 Wiley.

    Article  CAS  PubMed  Google Scholar 

  134. Caria A, Veit R, Sitaram R, Lotze M, Weiskopf N, Grodd W, et al. Regulation of anterior insular cortex activity using real-time fMRI. NeuroImage. 2007;35:1238–46.

    Article  PubMed  Google Scholar 

  135. deCharms C. Applications of real-time fMRI. Nat Rev Neurosci. 2008;9:720–9.

    Article  CAS  PubMed  Google Scholar 

  136. Sulzer J, Haller S, Scharnowski F, Weiskopf N, Birbaumer N, Blefari ML, et al. Real-time fMRI neurofeedback: progress and challenges. NeuroImage. 2013;76:386–99.

    Article  CAS  PubMed  Google Scholar 

  137. Weiskopf N. Real-time fMRI and its application to neurofeedback. Neuroimage United States. 2012;62:682–92.

    Article  Google Scholar 

  138. LaConte S. Decoding fMRI brain states in real-time. NeuroImage. 2011;56:440–54.

    Article  PubMed  Google Scholar 

  139. Pereira JA, Sepulveda P, Rana M, Montalba C, Tejos C, Torres R, et al. Self-regulation of the fusiform face area in autism spectrum: a feasibility study with real-time fMRI neurofeedback. Front Hum Neurosci. 2019;13:446.

    Article  PubMed  PubMed Central  Google Scholar 

  140. Direito B, Lima J, Simões M, Sayal A, Sousa T, Lührs M, et al. Targeting dynamic facial processing mechanisms in superior temporal sulcus using a novel fMRI neurofeedback target. Neuroscience. 2019;406:97–108.

    Article  CAS  PubMed  Google Scholar 

  141. Ramot M, Kimmich S, Gonzalez-Castillo J, Roopchansingh V, Popal H, White E, et al. Direct modulation of aberrant brain network connectivity through real-time NeuroFeedback. Turk-Browne N, editor. eLife. 2017;6:e28974 eLife Sciences Publications, Ltd.

    Article  PubMed  PubMed Central  Google Scholar 

  142. deCharms RC, Christoff K, Glover GH, Pauly JM, Whitfield S, Gabrieli JDE. Learned regulation of spatially localized brain activation using real-time fMRI. NeuroImage. 2004;21:436–43.

    Article  PubMed  Google Scholar 

  143. Hartwell KJ, Prisciandaro JJ, Borckardt J, Li X, George MS, Brady KT. Real-time fMRI in the treatment of nicotine dependence: a conceptual review and pilot studies. Psychol Addict Behav. 2013;27:501–9.

    Article  PubMed  Google Scholar 

  144. Li X, Hartwell KJ, Borckardt J, Prisciandaro JJ, Saladin ME, Morgan PS, et al. Volitional reduction of anterior cingulate cortex activity produces decreased cue craving in smoking cessation: a preliminary real-time fMRI study: nicotine and real-time fMRI. Addict Biol. 2013;18:739–48.

    Article  PubMed  Google Scholar 

  145. Liew S-L, Rana M, Cornelsen S, de Barros F, Filho M, Birbaumer N, et al. Improving motor corticothalamic communication after stroke using real-time fMRI connectivity-based neurofeedback. Neurorehabil Neural Repair. 2016;30:671–5.

    Article  PubMed  Google Scholar 

  146. Subramanian L, Hindle JV, Johnston S, Roberts MV, Husain M, Goebel R, et al. Real-time functional magnetic resonance imaging neurofeedback for treatment of Parkinson’s disease. J Neurosci. 2011;31:16309–17.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  147. Haller S, Birbaumer N, Veit R. Real-time fMRI feedback training may improve chronic tinnitus. Eur Radiol. 2010;20:696–703.

    Article  PubMed  Google Scholar 

  148. Young KD, Zotev V, Phillips R, Misaki M, Drevets WC, Bodurka J. Amygdala real-time functional magnetic resonance imaging neurofeedback for major depressive disorder: a review. Psychiatry Clin Neurosci. 2018;72:466–81.

    Article  PubMed  PubMed Central  Google Scholar 

  149. Sitaram R, Caria A, Veit R, Gaber T, Ruiz S, Birbaumer N. Volitional control of the anterior insula in criminal psychopaths using real-time fMRI neurofeedback: a pilot study. Front Behav Neurosci. 2014;8 [cited 2020 Sep 13]. Available from: https://www.frontiersin.org/articles/10.3389/fnbeh.2014.00344/full. Frontiers.

  150. Ruiz S, Lee S, Soekadar SR, Caria A, Veit R, Kircher T, et al. Acquired self-control of insula cortex modulates emotion recognition and brain network connectivity in schizophrenia. Hum Brain Mapp. 2013;34:200–12.

    Article  PubMed  Google Scholar 

  151. Zich C, Debener S, Kranczioch C, Bleichner MG, Gutberlet I, De Vos M. Real-time EEG feedback during simultaneous EEG–fMRI identifies the cortical signature of motor imagery. NeuroImage. 2015;114:438–47.

    Article  PubMed  Google Scholar 

  152. Zotev V, Phillips R, Misaki M, Wong CK, Wurfel BE, Krueger F, et al. Real-time fMRI neurofeedback training of the amygdala activity with simultaneous EEG in veterans with combat-related PTSD. NeuroImage: Clin. 2018;19:106–21.

    Article  Google Scholar 

  153. Montague PR, Berns GS, Cohen JD, McClure SM, Pagnoni G, Dhamala M, et al. Hyperscanning: simultaneous fMRI during Linked Social Interactions. NeuroImage. 2002;16:1159–64.

    Article  PubMed  Google Scholar 

  154. Baecke S, Lützkendorf R, Mallow J, Luchtmann M, Tempelmann C, Stadler J, et al. A proof-of-principle study of multi-site real-time functional imaging at 3T and 7T: Implementation and validation. Sci Rep. 2015;5:8413.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  155. Mueller C, Luehrs M, Baecke S, Adolf D, Luetzkendorf R, Luchtmann M, et al. Building virtual reality fMRI paradigms: a framework for presenting immersive virtual environments. J Neurosci Methods. 2012;209:290–8.

    Article  PubMed  Google Scholar 

  156. Willner P. Validation criteria for animal models of human mental disorders: learned helplessness as a paradigm case. Prog Neuropsychopharmacol Biol Psychiatry. 1986;10:677–90.

    Article  CAS  PubMed  Google Scholar 

  157. Woolf SH. The meaning of translational research and why it matters. JAMA. 2008;299:211–3.

    Article  CAS  PubMed  Google Scholar 

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This research was supported by awards from the NIMH (K23MH120510) and the Child Neurology Foundation.

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Cohen, A.L. Using causal methods to map symptoms to brain circuits in neurodevelopment disorders: moving from identifying correlates to developing treatments. J Neurodevelop Disord 14, 19 (2022). https://doi.org/10.1186/s11689-022-09433-1

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